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INNOVATIVE METHODOLOGY
Departments of 1Medicine, 2Radiology, 3Surgery, and 4Biostatistics, Columbia University, New York, New York; and the 5Department of Medicine, Tulane University, New Orleans, Louisiana
Submitted 5 April 2007 ; accepted in final form 13 August 2007
| ABSTRACT |
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inflammation; vein; vascular biology
| MATERIALS AND METHODS |
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Healthy subjects had to be 18 years old or older, nonsmokers, not hypertensive or diabetic, and not receiving regular medical therapies. All subjects signed an informed consent. The study protocol and the informed consent were approved by the local Institutional Review Board.
Venous endothelial sampling.
Venous endothelial cells were collected as previously described (3, 4). A 20-gauge angiocatheter was inserted into a superficial arm vein. Five 0.018-in. diameter J-shaped endovascular wires (Arrow, Reading, PA) were sequentially inserted through the angiocatheter and advanced for
10 cm to dislodge endothelial cells and trap them on the serrated surface of the wire. Wire tips were cut approximately at 4 cm and inserted into plastic tubing (length 5 cm, inner diameter 0.65 in.; Hopsira Lake Forest, IL). The tubing was distally connected to two sterile syringes (3 ml) (Becton Dickinson, Franklin Lakes, NJ), which were previously loaded with sterile endothelial dissociation buffer (EDB) [0.5x PBS (without CaCl2 or MgCl2), 0.5x Hanks' solution (without CaCl2, MgSO4, MgCl2, sodium bicarbonate, or phenol red), 0.5% bovine albumin fraction V, 2 mM EDTA (Invitrogen, Carlsbad, CA), 200 µg/ml heparin sodium Salt (Sigma, St. Louis, MO)] and 1 U/µl SUPERase·In RNAse inhibitor (Ambion, Austin, TX). Air was carefully removed from the system. The cells were collected from each individual wire by washing inside the tubing and then transferred to Eppendorf tubes for the endothelial purification step (see below). Potential complications (e.g., pain, phlebitis, infection, thrombosis) were assessed by history and physical examination at 1-wk clinical follow up.
Endothelial cell purification and preparation of cell lysates. Endothelial cells from the samples were purified using magnetic beads (Dynal, Lake Success, NY) coated with anti-CD146 antibody (Chemicon, Temecula, CA), a mouse monoclonal antibody specific for endothelial cells, as previously described (8). Endothelial cells purification was performed at 4°C to avoid alteration of endothelial phenotype. All experiments were carried out under a Benchtop UV Sterilization PCR Workstation to protect against environmental contamination. For the same reason, only filtered tip and individually wrapped RNase-DNase-free Eppendorf tubes were used. Routine quality control assessment was performed by reverse transcription PCR (RT-PCR) using endothelial, smooth muscle, and leukocyte markers to confirm the reliability of this purification step, as previously described (8). Two examples of the PCR products from a purified endothelial sample are shown in Fig. 1.
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RNA amplification. Because of the minute amount of RNA in the cell lysates, RNA isolation with highly efficient method, such as RNeasy Micro kit (Qiagen, Valencia, CA) or PicoPure RNA Isolation Kit (Molecular Devices), still resulted in the loss of most of the RNA, precluding real-time PCR analysis. The endothelial cell lysates were therefore subjected to linear RNA amplification using RiboAmp HS RNA Amplification Kit (Molecular Devices) before real-time PCR analysis. RNA amplification was otherwise carried out according to the manufacturer's instruction. Oligo(dT) primers were used to selectively amplify mRNA during the first round of RNA amplification. The quantity and quality of the amplified antisense RNA (aRNA) was assessed by spectrophotometer and Agilent Bioanalyzer (Agilent Technologies, Santa Clara, CA), respectively.
RT-PCR. Superscript III First Strand Synthesis System for RT-PCR (Invitrogen) was used to obtain cDNA from aRNA. In preliminary studies, different primer combinations/relative ratios of Oligo(dT)20, Oligo(dA)20, and Random hexamers were tested: a combination of 50 µM Oligo(dA)20 and 50 ng/µl random hexamers resulted in the best cDNA yield. The primers and 2 µg of aRNA (the same quantity of aRNA was used in all reactions) were incubated together for 10 min at 25°C, then for 50 min at 50°C. Otherwise the reaction was carried out as indicated by the manufacturer. Control experiments with no reverse transcription were also run to rigorously assess the efficacy of the DNase treatment.
Real-time PCR. Quantitative real-time PCR was performed using TaqMan method on ABI Prism 7900 HT Sequence Detection System (Perkin Elmer). TaqMan primers and probes for β-actin, Egr-1, and MCP-1 were designed using Primer Express Software (Perkin Elmer) to fall into the 500 bp of 3'-region of mRNA. Their relative efficiency was validated using 10x serially diluted RNA (range = 100–0.01 ng) pooled from human mammary gland PolyA+RNA, human lung PolyA+RNA, human spleen PolyA+RNA, and human heart PolyA+RNA (BD Biosciences, Palo Alto, CA), which are known to express high levels of MCP-1 and Egr-1 transcripts (data not shown). Real-time PCR products were sequenced to confirm the specificity of real-time PCR analysis using the AmpliCycle sequencing kit (Perkin Elmer). β-Actin was selected as an endogenous control due to its documented stability in hyperglycemic (1) and hyperlipidemic states (13), which are associated with atherosclerosis. Real-time PCR primer and probe sequences are listed in Table 1. In addition exon-exon boundary spanning receptor for advanced glycation end products (RAGE) primers (Applied Biosystems; GenBank accession number: NM_001136, Catalogue number: Hs00542592_g1) were used to confirm the absence of contamination from genomic DNA in aRNA samples. For real-time PCR reaction the following reagents were added: 1.25 µl cDNA solution + 12.5 µl TaqMan master mix (2x) + primers and probes for MCP-1, Egr-1, or β-actin, and nuclease-free water up to 25 µl total. This reaction mix was added to the wells as triplicates for each sample. Samples were considered acceptable for analysis when the cycle threshold (Ct) value for β-actin was <30 cycles. An outline of the steps leading from endothelial sampling to real-time PCR analysis is detailed in Fig. 2.
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Linearity of RNA amplification in HUVECs. Linearity of RNA amplification for Egr-1 was assessed by real-time PCR using RNA from 1,000 HUVECs grown in standard culture media (see above) before and after RNA amplification in five separate experiments. Linearity of RNA amplification for MCP-1 was assessed by real-time PCR using RNA from 1,000 HUVECs grown in standard culture media (control) and from 1,000 LPS-treated HUVECs before and after RNA amplification in three separate experiments. MCP-1 expression was also tested in three separate experiments using aRNA from 200 control HUVECs grown in standard culture media.
Statistical analysis.
Data are presented as means ± SD. The relative quantities of different mRNA transcripts were calculated after normalization of the data against β-actin (endogenous control) by use of the comparative Ct method (User Bulletin No. 2. ABI PRISM 7700 Sequence Detection System. Warrington, UK: Applied Biosystems, 1997). Relative gene copy number was accordingly derived using the formula 2–
Ct, where
Ct is the difference in amplification cycles required to detect amplification product (Ct) of target genes (i.e., Egr-1, MCP-1) compared with endogenous control gene (i.e., β-actin): relative copy number = 2–[Ct(target) – Ct(β-actin)]. Relative Egr-1 and MCP-1 expression as fold induction in patients vs. healthy subjects was quantified using the 
Ct method (18). In cultured endothelial cells, the agreement between the relative expression of Egr-1 and MCP-1 to β-actin before and after RNA amplification was assessed by exact paired Wilcoxon signed-rank test. In human subjects, the difference between the relative expression of Egr-1 and MCP-1 to β-actin in patients and healthy subjects was compared with the t-test. The categorical association between levels of Egr-1 and MCP-1 expression with vascular disease was assessed by
2 test. The value 0.05 was chosen as the significance level.
| RESULTS |
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Linearity of RNA amplification for Egr-1 was assessed by real-time PCR using RNA from HUVECs before and after amplification (Fig. 3A). The relative expression (
Ct) of Egr-1 to β-actin was 9.69 ± 1.85 (also equal to 2.20 ± 2.31 x 10–3 relative copy number) before, and 9.0 ± 0.70 after RNA amplification (also equal to 2.12 ± 0.90 x 10–3 relative copy number), with a cycle difference between pre- and postamplification of only 0.69 cycles. The Wilcoxon signed-rank statistic confirmed the agreement between pre- and postamplification analyses (P = 0.63).
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Ct) of MCP-1 to β-actin was 6.31 ± 1.60 before (also equal to 1.30 ± 0.14 x 10–2 relative copy number) and 9.88 ± 0.04 (also equal to 1.06 ± 0.03 x 10–3 relative copy number) after amplification, thus showing an amplification bias favoring β-actin over MCP-1. However, this bias was fixed at approximately three cycles, regardless of the concentration of MCP-1 in the sample. In HUVECs treated with LPS, the relative expression (
Cti) of MCP-1 to β-actin was 1.12 ± 0.21 before (also equal to 4.63 ± 0.65 x 10–1 relative copy number), and 4.46 ± 0.04 (also equal to 4.54 ± 0.13 x 10–2 relative copy number) after amplification. Because of this fixed amplification bias, the calculated difference in MCP-1 expression between control HUVECs and HUVECs treated with LPS was equal to 5.19 cycles (
Ct-
Cti) before amplification, and 5.42 cycles (
Ct-
Cti) after amplification. Considering that MCP-1 induction with LPS treatment in HUVECs is more than 30 folds, this small difference of 0.23 cycles is negligible (P = 0.50 by Wilcoxon signed-rank statistic). Similar results were obtained when the initial HUVECs input was reduced from 1,000 to 200 cells. Linear RNA amplification can thus be used to increase the sensitivity of real-time PCR, yet maintaining the relative ratios of gene expression.
MCP-1 and Egr-1 expression in the venous endothelium of patients with vascular disease and of healthy subjects. Seven patients (5 men, mean age 56 ± 12 yr) with history of cardiovascular events (4 with history of myocardial infarction, and 3 with history of limb ischemia requiring distal limb amputation in 2 of them), and 17 healthy subjects (8 men, mean age 39 ± 11 yr) were studied. Patients were older than healthy subjects (P < 0.05). All patients were diagnosed with Type 2 diabetes mellitus. Five patients were treated with insulin and two with oral hypoglycemic drugs. All patients also had a history of hypercholesterolemia and received treatment with a statin. Four of seven (57%) also had a history of hypertension. Four of seven (57%) were treated with angiotensin converting enzyme inhibitors. All patients received antiplatelet treatment.
All endothelial samples were successfully and purely amplified. There was no contamination of white blood cells or smooth muscle cells. Total aRNA ranged from 15 to 24 µg. Six of seven (86%) patients with advanced vascular disease and 14 of 17 (82%) healthy samples were acceptable for analysis based on the criteria defined above in MATERIALS AND METHODS. Overall, Ct value for β-actin averaged 25.30 ± 3.20 cycles (25.12 ± 3.00 cycles in healthy subjects and 25.82 ± 4.41 cycles in patients). The time for endothelial sampling and purification (i.e., from the sampling to the lysing of purified endothelial cells) averaged 54 ± 8 min.
Endothelial Egr-1 expression was 30-fold higher in patients with advanced vascular disease than in healthy subjects (0.66 ± 1.22 x 10–2 vs. 2.18 ± 2.82 x 10–4; relative copy number, P = 0.06; Fig. 4A). Endothelial MCP-1 expression was fivefold and significantly higher in patients than in healthy subjects (4.65 ± 5.32 x 10–3 vs. 1.00 ± 2.11 x 10–3 relative copy number, P < 0.05; Fig. 4B).
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Ct <14 (corresponding to a relative copy number of <6.10 x 10–5) as an arbitrary cut-off value. In healthy individuals, lower levels of Egr-1 and MCP-1 expression were detected in 8/14 (57%) and in 6/14 (43%) of the subjects respectively, whereas none of the vascular disease patients had lower levels of Egr-1 (P < 0.05) and MCP-1 expression (P = 0.05). The procedure of venous endothelium sampling was found to be safe. At 1-wk follow-up, only one patient of the total 24 included in this study developed superficial phlebitis. This phlebitis was painful, but otherwise benign in its course, requiring only treatment with non-steroidal anti-inflammatory drugs for 2 days.
| DISCUSSION |
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The method of linear RNA amplification described in this study allows reliable measurement of multiple transcripts in a very small number of patient-derived endothelial cells. The linearity of RNA amplification was confirmed by real-time PCR using RNA from primary cultured endothelial cells. Although the degree of amplification varies slightly for different genes, the relative ratio of gene expression is well maintained. Therefore, this technique is well suited to simultaneously monitor over time the expression of many endothelial genes relative to an internal control.
Experimental evidence has implicated Egr-1 and MCP-1 as pivotal mediators of atherosclerosis (5, 8, 11, 12, 16, 17, 20). Egr-1, induced by hyperglycemia, vascular injury, and hypoxia, is a zinc finger transcription factor that promotes expression of key inflammatory mediators and growth factors (11). Mice deficient in Egr-1 display decreased atherosclerosis and vascular inflammation in atherosclerosis-prone apolipoprotein E-deficient mice (11). MCP-1 is a chemokine whose expression early in atherosclerosis is critical for monocyte adhesion to the endothelium (5, 16, 17).
Molecular analysis of the venous endothelium using vascular endothelial sampling coupled to quantitative analysis of gene transcripts by real-time PCR indicates that expression of Egr-1 and MCP-1 are increased in patients with advanced vascular disease compared with healthy subjects. However, our results must be interpreted with caution. In our study, patients were older, all had diabetes and hyperlipidemia, and most of them had history of hypertension. In addition, they were all aggressively treated for their cardiovascular and metabolic conditions. The small number of subjects enrolled in this study does not allow identifying a significant association between these clinical variables and endothelial Egr-1 and MCP-1 expression. However, the main objectives of this study were 1) to determine whether gene expression can be reliably quantified in a small number of endothelial cells collected by endovascular sampling, and 2) to determine whether expression of proatherosclerotic genes is increased in the venous endothelium of patients with arterial vascular disease. Age, diabetes, hyperlipidemia, hypertension, and drug treatment might all have contributed to alter the endothelial phenotype in our patients with advanced vascular disease (7). Additional studies with larger cohorts of subjects will be necessary to establish a link between these clinical variables on one side and endothelial Egr-1 and MCP-1 expression on the other.
Mechanical manipulation of endothelial cells during sampling and purification is another potential confounder that may have altered the endothelial phenotype. However, duration of these steps was similar (
50 min) in samples from patients and healthy volunteers, thus minimizing the variance.
One potentially meaningful observation of this study relates to the wide range of endothelial Egr-1 and MCP-1 expression that we observed within each group of patients and healthy subjects (Fig. 4). This finding may suggest that vascular disease is properly treated in some patients, but not in others, and that some healthy subjects are not as "healthy" as one may think. Prospective studies may establish whether a higher level of venous expression of proatherosclerotic genes predicts a worse outcome. If so, clinicians could be more aggressive with traditional therapies in these patients, and trials of specific pharmacologic therapies, suggested by individual endothelial profiling, could be planned.
This study confirms the safety and feasibility of venous endothelial sampling in an ambulatory outpatient setting. Sampling of sites of atherosclerosis in the arterial compartment carries higher risks (22) and thus will have limited role in the longitudinal monitoring of endothelial gene expression in patients with vascular diseases. Although it is not subjected to the same hemodynamics of the arterial compartment, which are necessary for the development of atherosclerosis, the venous vasculature is chronically exposed to the same circulating levels of proinflammatory factors (e.g., glucose, lipids, cytokines) and drugs that modulate the various functions of endothelial cells. For example, hyperglycemia alters structure and function of arteries and veins (2, 15). Correction of metabolic derangement is thus expected to influence not only the arterial, but also the venous endothelial phenotype as well. In addition, recent studies reported a highly significant positive correlation between nitrotyrosine formation (an intracellular marker of oxidative stress) and expression of other proteins in endothelial cells obtained from venous samples compared with arterial samples (6, 19). Analysis of endothelial gene expression profile in veins may therefore shed light on important components of the atherosclerotic process that are frequent targets of therapeutic interventions.
In conclusion, we introduced and validated a novel approach to accurately measure gene transcripts in venous endothelial cells collected from human subjects. Our results suggest that the expression of genes implicated in the atherosclerotic process is increased in the venous endothelium of patients with advanced vascular disease. Novel vascular-targeted biomarkers may help tracking the vascular impact of cardiovascular and metabolic diseases. As a frank clinical event, such as myocardial infarction, stroke, or even death, reflects the highly advanced or end stages of vascular disease, gene expression profiling of venous endothelial cells has the potential to identify key and accessible biomarkers to predict the likelihood of such event and to monitor the impact of therapeutic interventions.
| GRANTS |
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Current address of L. Feng: Department of Radiological Sciences, University of California at Los Angeles, Los Angeles, CA.
| ACKNOWLEDGMENTS |
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| FOOTNOTES |
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The costs of publication of this article were defrayed in part by the payment of page charges. The article must therefore be hereby marked "advertisement" in accordance with 18 U.S.C. Section 1734 solely to indicate this fact.
* Dr. Colombo and Dr. Feng contributed equally to this study. ![]()
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CT. Methods 25: 402–408, 2001.[CrossRef][Web of Science][Medline]This article has been cited by other articles:
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